Somatic Variant Explorer
Tumour–normal review centred on VAF, depth and technical support.
Explore example →Somatic genomics
Somatic variants
Analysis of somatic alterations in research projects, with a strategy adapted to tumour–normal or tumour-only design, available data and the expected level of reporting.
Data & design
The analysis is defined from sequencing type, presence or absence of a matched normal, depth and experimental context.
Bioinformatics analysis
- Somatic SNV and indel review
- VAF, depth and alternate-read support
- Matched-normal comparison when available
- CNV, LOH or structural alterations where supported
- Candidate annotation and prioritisation
Results provided
Annotated variant tables, support metrics, quality-control elements, summary figures, methods and interactive reporting according to the project.
Interactive example