Bioinformatics expertise, workflows & methodological support

Engagements structured around the scientific question, data quality, analysis reproducibility and expected deliverables.

Bioinformatics analysis & omics data

Analytical support for omics data, from data qualification to statistical inference, bioinformatics interpretation and reporting.

Analytical scope

Data qualification, quality control and consistency between samples and metadata
Pre-processing and workflows adapted to the technology, design and reference resources
Statistical modelling incorporating contrasts, covariates, multiple testing and relevant diagnostics
Interpretation, visualisation, reporting and analytical provenance documentation

References, versions, parameters and analytical decisions are documented according to the expected level of reproducibility.

Analytical design & methodological review

Support before or during a project to align the scientific question, study design, available data and analytical methods.

Scientific scoping

Assess alignment between the question, design, sampling, metadata and available data
Define controls, contrasts, covariates and interpretation criteria
Review an existing workflow or analysis and identify bias, confounding and methodological limitations
Structure a reanalysis, validation or publication-oriented analysis

Reproducible workflow engineering

Design of versioned, portable workflows to standardise processing, reduce manual intervention and provide explicit analytical provenance.

Workflow engineering

Design, refactoring and modularisation of bioinformatics workflows
Automation of quality control, processing, integrity checks and reporting
Versioning of parameters, reference resources, software environments and dependencies
Adaptation to local, HPC or cloud environments when required by the context

Testing, error recovery, traceability and portability are defined according to workflow criticality and execution frequency.

Scientific reporting & analytical delivery

Results are structured for scientific review, interpretation and reuse, with a level of detail appropriate to the recipient.

Results & provenance

Structured analytical reports with explicit methods, assumptions and limitations
Figures and tables directly linked to the evaluated contrasts and questions
Interactive reports when result exploration justifies them
Targeted interfaces or scientific tools when the need goes beyond reporting

Training & knowledge transfer

Targeted training to understand methodological choices, use a workflow and develop reproducible bioinformatics analysis practices.

Tailored programme

Individual session or small-group training
Content adapted to level, scientific context and operational objectives
Exercises based on teaching datasets or authorised data
Materials, reproducible examples and documentation according to the programme

The programme is defined from the skills to be acquired and the participants’ real use cases.

International scope

Bioinformatics services for projects in Morocco, France and internationally

UbSeq can support laboratories, research teams, companies, researchers and project holders in Morocco, France, Europe and the Middle East, including the United Arab Emirates, Qatar and Saudi Arabia. Each engagement remains defined by the scientific question, available data and required level of support.

Cross-cutting need

A scope built around the scientific question

Scoping, analysis, automation and reporting can be combined within the same engagement when this strengthens methodological coherence and project reproducibility.View collaboration options →

Describe your need